RNAi Screening Wiki
The Wiki presents an overview of methods and technologies used for large-scale RNAi screening in Drosophila and human cells. Please feel free to contact us in case there are any suggestions or questions.
Computational tools
- Description of computational tools for HTS data analysis
- E-RNAi - a web-based tool for the design of RNAi constructs
- Next-RNAi - a software for the design and evaluation of genome-wide RNAi libraries
- GenomeRNAi - a comprehensive database for RNAi phenotypes from Drosophila and human cells
- web cellHTS2 - a web-based implementation of cellHTS2 for the statistical analysis of screening experiments
Screening - General considerations
- General overview
- RNAi screening - overview
- Small molecule screening - overview
- Assay development - general considerations
- Cell-based reporter screens
- Cell-based imaging screens
- Data analysis
RNAi Screening in Drosophila
RNAi Screening in human cells
RNAi libraries and Instrumentation
Collaborators Area
General information
- Overview
- Team
- Contact us and location
- How-to perform a screen with the RNAi platform
Courses
Literature
Links
- Research lab homepage
- EU FP7 CancerPathways
Assay considerations
Cell-based screens by automated imaging
Combinatorial screening assays
Compound screening
Contact us
Data analysis
Drosophila in vivo RNAi library
Drosophila RNAi libraries
General overview
High-throughput RNAi Screening Platform Funding
High-throughput RNAi Screening Platform Overview
HTS Platform Information Request Form
Human shRNA library SIGMA
Information on the web cellHTS application
Instruments overview
Luminescence reporter
Overview computational tools
Overview Protocols
Overview reagents
Platform location
Protocols cell culture
Protocols compound screening
Protocols RNAi library generation
Publications on methods
Published screens
RNAi libraries
RNA interference (RNAi) screening
RNAi protocols
RNAi screening in Drosophila cells
Team